philentropy - Similarity and Distance Quantification Between Probability Functions
Computes 46 optimized distance and similarity measures for comparing probability functions (Drost (2018) <doi:10.21105/joss.00765>). These comparisons between probability functions have their foundations in a broad range of scientific disciplines from mathematics to ecology. The aim of this package is to provide a core framework for clustering, classification, statistical inference, goodness-of-fit, non-parametric statistics, information theory, and machine learning tasks that are based on comparing univariate or multivariate probability functions.
Last updated 10 days ago
distance-measuresdistance-quantificationinformation-theoryjensen-shannon-divergenceparametric-distributionssimilarity-measuresstatistics
12.42 score 132 stars 22 packages 420 scripts 4.0k downloads
myTAI - Evolutionary Transcriptomics
Investigate the evolution of biological processes by capturing evolutionary signatures in transcriptomes (Drost et al. (2018) <doi:10.1093/bioinformatics/btx835>). This package aims to provide a transcriptome analysis environment to quantify the average evolutionary age of genes contributing to a transcriptome of interest.
Last updated 17 hours ago
biological-processesconservationevo-devoevolutionevolutionary-transcriptomicsexpression-profilesgene-expressiongene-setsmytaistudies-transcriptomestranscriptome
8.87 score 41 stars 63 scripts 173 downloads